PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AT2G20350.1
Common NameERF120, F11A3.10
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Family ERF
Protein Properties Length: 158aa    MW: 17460.7 Da    PI: 9.2601
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AT2G20350.1genomeTAIRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.45.5e-1685135155
          AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  +++kGVr ++ +g+W+AeI+dps    + r +lg+f tae+Aaka+  a+ ++ g
  AT2G20350.1  85 KKHKGVRKKP-SGKWAAEIWDPSL---KVRRWLGTFPTAEMAAKAYNDAAAEFVG 135
                  589****999.7*********943...5999****************99988765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000184.61E-1885121No hitNo description
SuperFamilySSF541713.73E-1586137IPR016177DNA-binding domain
SMARTSM003801.5E-3086150IPR001471AP2/ERF domain
PROSITE profilePS5103219.7386147IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.2E-2086138IPR001471AP2/ERF domain
PRINTSPR003678.7E-78798IPR001471AP2/ERF domain
PRINTSPR003678.7E-7109125IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009873Biological Processethylene-activated signaling pathway
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Plant Ontology ? help Back to Top
PO Term PO Category PO Description
PO:0000293anatomyguard cell
Sequence ? help Back to Top
Protein Sequence    Length: 158 aa     Download sequence    Send to blast
MENSENVPSY DQNINFTPNL TRDQEHVIMV SALQQVISNV GGDTNSNAWE ADLPPLNAGP  60
CPLCSVTGCY GCVFPRHEAI IKKEKKHKGV RKKPSGKWAA EIWDPSLKVR RWLGTFPTAE  120
MAAKAYNDAA AEFVGRRSAR RGTKNGEEAS TKKTTEKN
Expression -- Microarray ? help Back to Top
Source ID E-value
GEO183993260.0
Genevisible265304_at0.0
Expression AtlasAT2G20350-
AtGenExpressAT2G20350-
ATTED-IIAT2G20350-
Functional Description ? help Back to Top
Source Description
TAIRencodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11.
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapAT2G20350.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Phenotype -- Mutation ? help Back to Top
Source ID
T-DNA ExpressAT2G20350
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0246980.0BT024698.1 Arabidopsis thaliana At2g20350 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_179625.11e-117ethylene-responsive transcription factor ERF120
SwissprotQ9SK671e-119EF120_ARATH; Ethylene-responsive transcription factor ERF120
TrEMBLD7L2W03e-91D7L2W0_ARALL; Putative uncharacterized protein
STRINGAT2G20350.11e-116(Arabidopsis thaliana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM34721562
Representative plantOGRP6161718
Publications ? help Back to Top
  1. Riechmann JL, et al.
    Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes.
    Science, 2000. 290(5499): p. 2105-10
    [PMID:11118137]
  2. Nakano T,Suzuki K,Fujimura T,Shinshi H
    Genome-wide analysis of the ERF gene family in Arabidopsis and rice.
    Plant Physiol., 2006. 140(2): p. 411-32
    [PMID:16407444]